Date: Thu, 28 Mar 2024 22:37:29 +0700 (NOVT)
Message-ID: <724402066.87082.1711640249268@ugene.net>
Subject: Exported From Confluence
MIME-Version: 1.0
Content-Type: multipart/related;
boundary="----=_Part_87081_286275137.1711640249268"
------=_Part_87081_286275137.1711640249268
Content-Type: text/html; charset=UTF-8
Content-Transfer-Encoding: quoted-printable
Content-Location: file:///C:/exported.html
Functions Supported for Multiple Alignment Data
Functions Supported for Multiple Alignment Data
- createAlignment (Sequence seq1, Sequence seq2, ...=
) =E2=80=94 returns the alignment created from the sequences.
- addToAlignment (MAlignment aln, Sequence seq, int=
row =3D -1) =E2=80=94 adds the sequence to the specified row of the alignm=
ent. If the =E2=80=9Crow=E2=80=9D parameter is not specified the sequence i=
s added to the end of the alignment.
- sequenceFromAlignment (MAlignment aln, int row) =
=E2=80=94 returns the sequence from the specified row of the alignment.
- findInAlignment (MAlignment aln, Sequence seq) =
=E2=80=94 searches the alignment for the specified string. Return the numbe=
r of the row if the sequence has been found or =E2=80=9C-1=E2=80=9D if it h=
asn=E2=80=99t been found.
- findInAlignment (MAlignment aln, QString name) =
=E2=80=94 searches the alignment for a sequence with the specified name.
- removeFromAlignment (MAlignment aln, int row) =E2=
=80=94 removes a sequence from the specified row of the alignment.
- rowNum (MAlignment aln) =E2=80=94 returns the num=
ber of rows in the alignment.
- columnNum (MAlignment aln) =E2=80=94 returns the =
length of the alignment.
- alignmentAlphabetType (MAlignment aln) =E2=80=94 =
returns the alignment=E2=80=99s alphabet.
------=_Part_87081_286275137.1711640249268--