Date: Thu, 28 Mar 2024 21:32:33 +0700 (NOVT)
Message-ID: <1709809685.86878.1711636353065@ugene.net>
Subject: Exported From Confluence
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Building Phylogenetic Tree
Building Phylogenetic Tree
To build a tree from an alignment either press the =
span>Build Tree<=
span> button on the toolbar, select the item in the alignment context menu or the Actions =E2=80=A3 Tree =E2=80=
=A3 Build Tree item in the main menu.
=20
=20
=
=20
=20
Also you can use Tree Settings t=
ab of the Options Panel:
=20
=20
=
=20
=20
Three methods for building phylogenetic t=
rees are supported:
- The PHYLIP Neighbour-Joining meth=
od. The PHYLIP package impleme=
ntation of the method is used under the hood.
- The MrBayes external tool. Check&=
nbsp;MrBayes Web Site for more details.
- PhyML Maximum Likelihood method. Check PhyML Maximum Li=
kelihood Web Site for more details.
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