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Task Name: = hmm2-build
Builds a profile HMM using the HMMER2 too= ls.
Parameters:
in =E2=80=94 semicolon-separated list of input multi= ple sequence alignment files. [String, Required]
out =E2=80=94 output HMM file. [String, Required]
name =E2=80=94 name of the profile HMM. [String, Opt= ional, Default: =E2=80=9Chmm_profile=E2=80=9D]
calibrate =E2=80=94 enables/disables calibration. [B= oolean, Optional, Default: true]
seed =E2=80=94 random seed, a non-negative integer. = [Number, Optional, Default: 0]
Example:
ugene hm= m2-build --in=3DCBS.sto --out=3DCBS.hmm=20