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Searches regions in a sequence wi= th GC content in the specified range.
Parameter | Description | Default value |
---|---|---|
Min GC content | Min GC content value in percents. | 20% |
Max GC content | Max GC content value in percents. | 40% |
Min length | Minimum length of a region. | 50bp |
Max length | Maximum length of a region. | 1000bp |
Type: find-gc
Parameter | Parameter in the GUI | Type |
---|---|---|
region-start | Min GC content | numeric |
region-end | Max GC content | numeric |
min-len | Min length | numeric |
max-len | Max length | numeric |