It is possible to apply different There are various coloring schemes for an alignment, so that nucleotide or amino acid characters are colored depending on some rulesDNA and amino alphabets available.
To set another coloring scheme, select the required item in the main (Actions ‣ Colors) or context menu (Colors) of the Alignment Editor, or in the Color combo box on the Highlighting tab on the Options Panel.change the scheme, activate the Colors context menu:
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The following schemes options are available for an alignment with a nucleotide alphabet:
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or use the Highlighting tab of the Options Panel
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