Writes all supplied sequences to file(s) in FASTQ format.
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Element type: write-fastq
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Output file (required) | Location of the output data file. If this attribute is set, then the “Location” slot is not taken into account. |
numeric
Available values are:
- 0 - for overwrite
- 1 - for append
- 2 - for rename
| url-out | string | |||
| Existing file | If a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format). | Rename | write-mode | numeric Available values are:
|
| Accumulate objects | Accumulates all incoming data in one file or creates separate files for each input. In the latter case, an incremental numerical suffix is added to a file name. | True |
Parameters in Workflow File
Type: write-fastq
| accumulate |
| boolean |
Input/Output Ports
The element has 1 input port:
Name in GUI: Sequence
Name in Workflow File: in-sequence
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Sequence | sequence | sequence |
| Location | url | string |