Child pages
  • Repeats Finding

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Migrated to Confluence 5.3

Usage example:

Open a DNA sequence in the Sequence View and select the Analyze ‣ Find repeats... context menu item:

HTML
<center>
     <br>
     <img src="/wiki/download/attachments/10289709/Repeats Finding.png"/>
     <br>
</center>

The dialog will appear that allows specifying repeat parameters and the annotations table document to save the results into:

HTML
<center>
     <br>
     <img src="/wiki/download/attachments/17468938/Repeats Finding_1.png"/>
     <br>
</center>

The dialogues status line displays approximate repeats number that will be found with the current settings.

The Advanced tab provides additional repeats finding options:

HTML
<center>
     <br>
     <img src="/wiki/download/attachments/17468938/Repeats Finding_2.png"/>
     <br>
</center>

The found repeats are saved and displayed as annotations to the DNA sequence:

HTML
<center>
     <br>
     <img src="/wiki/download/attachments/10289709/Repeats Finding_3.png"/>
     <br>
</center>