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  • Convert UQL Schema Results to Alignment

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  1. Input sequence(s): On this page you must input sequence(s). 

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  2. Annotate with UQL: On this page you can modify annotation and output settings. 

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    The following parameters are available:

    UQL schema fileSchema file.
    MergeMerges regions of each result into single annotation if true.
    OffsetSpecifies left and right offsets for merged annotation (if 'Merge' parameter is set to true).
    Annotation namesFile with annotation names, separated with whitespaces or list of annotation names which will be accepted or filtered. Use space as the separator.
    Accept or filterSelects the name filter: accept specified names or accept all except specified.
    Result fileLocation of output data file. If this attribute is set, slot "Location" in port will not be used.
    Document formatDocument format of output file.