Reads sequences and annotations if any from local or remote files.
Parameters in GUI
| Parameter | Description | Default value |
|---|---|---|
| Input files (required) | Semicolon-separated list of paths to the input files. | |
| Mode (required) | If the file contains more than one sequence, “split” mode sends them as is to output, while “merge” appends all the sequences and outputs the merged sequence. | Split |
| Merging gap | In the “merge” mode, inserts the specified number of gaps between the original sequences. This is helpful e.g. to avoid finding false positives at the merge boundaries. | 10 |
| Accession filter | Only reports a sequence with the specified accession (id). |
Parameters in Schema File
Type: read-sequence
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| url-in | Input files | string |
| mode | Mode | numeric Available values are:
|
| merge-gap | Merging gap | numeric |
| accept-accession | Accession filter | string |
Input/Output Ports
The element has 1 output port:
Name in GUI: Sequence
Name in Schema File: out-sequence
Slots:
| Slot In GUI | Slot in Schema File | Type |
|---|---|---|
| Sequence | sequence | sequence |
| Set of annotations | annotations | annotation-table |
| Source URL | url | string |