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Type: cuffmerge
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| out-dir | Output directory | string |
| ref-annotation | Reference annotation | string |
| ref-seq | Reference sequence | string |
| min-isoform-fraction | Minimum isoform fraction | numeric |
| cuffcompare-tool-path | Cuffcompare tool path | string |
| path | Cuffmerge tool path | string |
| tmp-dir | Temporary directory | string |
Input/Output Ports
The element has 1 input port:
Name in GUI: Set of annotations
Name in Schema File: in-assembly
Slots:
| Slot In GUI | Slot in Schema File | Type |
|---|---|---|
| Set of annotations | in-annotations | ann_table |
And 1 output port:
Name in GUI: Set of annotations
Name in Schema File: out-assembly
Slots:
| Slot In GUI | Slot in Schema File | Type |
|---|---|---|
| Set of annotations | out-annotations | ann_table |