SPAdes – St. Petersburg genome assembler. Click this link to open SPAdes homepage. SPAdes is embedded as an external tool into UGENE.
Open Tools ‣ DNA assemblyNGS data analysis.
| HTML |
|---|
<center>
<br>
<img src="/wiki/download/attachments/1405753517467820/SPAdes.png"/>
<br>
</center> |
Select the Assemble genomesthe Genome de novo assembly item to use the SPAdes.
The Assemble Genomes dialog will appear.
| HTML |
|---|
<center>
<br>
<img src="/wiki/download/attachments/1405753517467820/SPAdes_1.png"/>
<br>
</center> |
...