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The default value for the genetic code for a nucleotide sequence translation is read by UGENE from the sequence file when it is available. One can also set up the genetic code for the sequence using the Select genetic code menu bu:
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All analysis routines (like HMMER, ORF finding, etc.) will use this code by default. |
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Codon table
To refresh the knowledge about the amino acid codes, select the Show codon table button 
on the Sequence View global toolbar. The codon table appears at the upper part of the window:
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