Using thist workflow you can select (or reject) only those sequence that match any pattern you input. To find sequences matching a pattern:
- In Read Sequence element specify a list of sequences you need to filter
- In Find Pattern element input you pattern(s) or file with pattern in any sequence or newline-delimited format.
- In Write Sequence element specify an output file
To find sequences that DO NOT match a pattern:
- Put "Rest" instead "hasPattern" in Filter element.
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<center> <br> <img src="/wiki/download/attachments/3244625/Filter sequence that match a pattern.png"/> <br> </center> |
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If you haven't used the workflow samples in UGENE before, look at the "How to Use Sample Workflows" section of the documentation. |