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  • Extract Consensus as Sequence

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For each input multiple alignment, the workflow calculates the consensus and saves it to a fasta file, named according to the name of the input alignment. 

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  1. Input Multiple Alignments: On this page you must input multiple alignments file(s). 

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  2. Extracting Consensus Settings: On this page you can modify extracting settings. 

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    The following parameters are available:

    AlgorithmThe algorithm of consensus extracting.
    ThresholdThe threshold of the algorithm.
    Keep gapsSet this parameter if the result consensus must keep the gaps.
  3. Output Files: For each input alignment the workflow outputs separate sequence file with consensus in it. 

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