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  • Write Alignment Element

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Parameters in GUI

ParameterDescriptionDefault value
Output file (required)Location of the output data file. If this parameter is set, then the “Location” slot is not taken into account. 
Existing fileIf a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format).Rename
Document formatFormat of the output file.clustal

Parameters in Schema Workflow File

Type: write-msa

ParameterParameter in the GUIType
url-outOutput filestring
write-modeExisting file

numeric

Available values are:

  • 0 - for overwrite
  • 1 - for append
  • 2 - for rename
document-formatDocument format

string

Available values are:

  • clustal
  • mega
  • msf
  • sam
  • srfasta
  • stockholm

Input/Output Ports

The element has 1 input port:

Name in GUI: Multiple sequence alignment

Name in Schema File Workflow File: in-msa

Slots:

Slot In GUISlot in Schema Workflow FileType
MSAmsamsa
Locationurlstring