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Creating, editing, aligning of multiple sequence alignments


2. Multiple sequence alignment (MSA Editor).  If you open a multiple sequence alignment the , for example ugene/data/samples/CLUSTALW/COI.aln, Alignment Editor appears. The following views are available: the project view with your documents, the MSA Alignment Editor with your alignment, options panel with additional info and algorithms. You :

  <img src="/wiki/download/attachments/2883700/msa.png"/>

Alignment Editor - an object view used to visualize and edit DNA, RNA or protein multiple sequence alignments.








You can also use algorithms and instruments from the context menu or the toolbar: 





  <img src="/wiki/download/attachments/2523429/pic5.png"/>