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See the list of all available formats here.

Element type: read-sequence

Parameters in GUI

Parameter	Description	Default value	Parameter in Workflow File	Type
Input files	Semicolon-separated list of datasets to the input files.		url-in

string
Mode	If the file contains more than one sequence, “split” mode sends them as is to output, while “merge” appends all the sequences and outputs the merged sequence.	Split	mode	numeric Available values are: 0 - for split mode 1 - for merge mode
Merging gap	In the “merge” mode, inserts the specified number of gaps between the original sequences. This is helpful e.g. to avoid finding false positives at the merge boundaries.	10	merge-gap	numeric
Sequence count limit	Split mode only. Read only first N sequences from each file. Set 0 value for reading all sequences.	0	sequence-count-limit	numeric
Accession filter	Only reports a sequence with the specified accession (id).

Parameters in Workflow File

ParameterParameter in the GUITypeurl-inInput filesstringmodeMode

numeric

Available values are:

merge-gapMerging gapnumericsequence-count-limitSequence count limitnumeric

Type: read-sequence

accept-accession

Accession filter

string

Input/Output Ports

The element has 1 output port:

Name in GUI: Sequence

Name in Workflow File: out-sequence

Slots: