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The element gets message(s) with annotations data and saves the data to the specified file(s) in one of the appropriate formats (GenBank, GTF, etc.).

Parameters in GUI

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Element type: write-annotations

Parameters

Parameter	Description	Default value	Parameter in Workflow File	Type
Data storage	Place to store workflow results: local file system or a database.

	data-storage	string
Output file	Location of the output data file. If this attribute is set, slot “Location” in port will not be used.		url-out

string
Output file suffix	This suffix will be used for generating the output file name.

	url-suffix	string
Existing file	If a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format).	Rename	write-mode	numeric Available values are: 0 - for overwrite 1 - for append 2 - for rename
Document format	Document format of output file.	genbank	document-format	string Available values are: CSV GenBank GFF
Annotations name	Object name of the annotations.	unknown feature	annotations-name	string
CSV separator	String which separates values in CSV file(s).	”,” (comma)	separator	string
Write sequence name	Write sequence to CSV file(s).	False

Parameters in Workflow File

ParameterParameter in the GUITypedata-storageData storagestringurl-outOutput filestringurl-suffixOutput file suffixstring

Type: write-annotations

write

-modeExisting file

numeric

Available values are:

document-formatDocument format

string

Available values are:

annotations-nameAnnotations namestringseparatorCSV separatorstringwrite

_names

Write sequence name

boolean

The element has 1 input port:

Name in GUI: Input annotations

Name in Workflow File: in-annotations

Slots: