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To learn more about UQL workflows read UGENE Query Designer Manual.
Parameters in GUI
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Element type: query
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Workflow (required) | UQL workflow file. | schema |
| string | ||||
| Merge | Merges regions of each result into a single annotation. | False | merge | boolean |
| Offset | If the Merge parameter is set to True, adds left and right offsets of the specified length to the annotation. | 0 |
| offset |
| numeric |
Input/Output Ports
The element has 1 input port:
Name in GUI: Input sequences
Name in Workflow File: in-sequence
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Sequence | sequence | sequence |
And 1 output port:
Name in GUI: Result annotations
Name in Workflow File: out-annotations
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Set of annotations | annotations | annotation-table |