Given a list of genes, using Bioconductor (GO, GOstats) and DAVID at NIH.
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Element type: conduct-go-id
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Output directory | The directory to store Conduct GO results. |
| output-dir | string | |||
| Title | Title is used to name the output files - so make it meaningful. | Default | title | string |
| Gene Universe | Select a gene universe. | hgu133a.db |
Parameters in Workflow File
Type: conduct-go-id
string
| gene-universe |
| string |
Input/Output Ports
The element has 1 input port:
Name in GUI: Conduct GO data
Name in Workflow File: in-data
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Target genes | in-ann | ann-table-list |