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<center>
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<img src="/wiki/download/attachments/4227374/Circular Viewer_1.png"/>
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Also you can mark sequences as circular in UGENE by the Mark as circular sequence context menu item. When the sequences are marked as Circular, the Circular View is automatically opened for them in all opened Sequence View windows.
The Restriction Sites Map will appear automatically. To show restriction sites the Show Restriction Sites menu should be checked. To hide the map click on the following button:
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<center>
<br>
<img src="/wiki/download/attachments/4227374/Circular Viewer_1_1.png"/>
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</center> |
| Note |
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The Circular Viewer is opened automatically when the Sequence View is opened for a plasmid. |
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<center>
<br>
<img src="/wiki/download/attachments/4227374/Circular Viewer_2.png"/>
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</center> |
This will also affect the Sequence View. You can select a sequence region with Ctrl and the selection will be inverted.
Note that the circular view is zoomed automatically when the Circular Viewer area is resized:
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It is possible to rotate the circular view using the mouse wheel. Also it is possible to shift the start point of a circular molecule by Edit sequence -> Set new sequence origin context menu item.
Use the Export ‣ Save circular view as image context menu or the Actions main menu item to save the image of the circular view.
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Here you can browse for the file name, select the width, height and resolution of the image as well as its format: svg, ps, pdf, bmp, jpeg, jpg, png, ppm, tif or tiff. Also you can include position and selection markers to the image by the corresponding checkboxes.
Note, that if a sequence file contains several sequences it is possible to view the circular views of the sequences in the same Circular Viewer area.
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