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The dialog asks where to save the annotation. It could be either an existing annotation table object , or an a new annotation table, or an auto-annotations table (if it is available).
You can also specify the name of the group and the name of the annotation. If the group name is set to <auto> UGENE will use the group name as the name for the group. You can use the ‘/’ characters in this field as a group name separator to create subgroups. If the annotation name is set to by type UGENE will use the annotation type from the Annotation type: table as the name for the annotation. Also, you can add a description in the corresponding text field.
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Note, that by default the Location field contains the coordinates of the selected sequence region.
For amino acid sequences there is no "Complement" check box in the "Simple format" group in the Location section and there is no "Add/remove complement flag" button in the "GenBank/EMBL format" group.
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Once the Create button is pressed the annotation is created and highlighted both in the Sequence overview and the Sequence details view areas:
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