If you have a list of files with sequences and separate files with annotation and you want to merge sequences and annotation, this workflow might help you. For instance, you have sequence in FASTA format and separate annotation in GFF. You want to merge them and write annotated sequences into Genbank files. Be default, multiplexer takes sequences and annotation one by one, sticks one annotation to one sequence and passes it to the output. But you may change that behavior in parameters of Multiplexer.

If you haven't used the workflow samples in UGENE before, look at the "How to Use Sample Workflows" section of the documentation.

Workflow Sample Location

The workflow sample "Merge Sequences and Annotations" can be found in the "Scenarios" section of the Workflow Designer samples.

Workflow Image

The workflow looks as follows:

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  <img src="/wiki/download/attachments/16122735/Merge Sequences and Annotations.png"/>
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Workflow Wizard

The wizard has 3 pages.

  1. Input sequence(s): On this page you must input sequence(s). 

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  <img src="/wiki/download/attachments/16122735/Merge Sequences and Annotations_1.png"/>
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  2. Input annotation(s): On this page you must input annotation(s). 

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  <img src="/wiki/download/attachments/16122735/Merge Sequences and Annotations_2.png"/>
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  3. Output data: On this page you can modify output parameters. 

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  <img src="/wiki/download/attachments/16122735/Merge Sequences and Annotations_3.png"/>
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