Input one or several files with assembled NGS reads in SAM, BAM, or UGENEDB format.
The element outputs message(s) with the assembled reads data.
See the list of all available formats here.
| Parameter | Description | Default value |
|---|---|---|
| Input file(s) | Input files. | Dataset 1; |
Type: read-assembly
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| url-in | Input file(s) | string |
The element has 1 output port:
Name in GUI: Assembly
Name in Workflow File: out-assembly
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Assembly data | assembly | assembly |
| Dataset name | dataset | string |
| Source URL | out-url | string |