WEVOTE (WEighted VOting Taxonomic idEntification) is a metagenome shortgun sequencing DNA reads classifier based on an ensemble of other classification methods (Kraken, CLARK, etc.).

Element type: wevote-classify

Parameters

ParameterDescriptionDefaultvalueParameter in Workflow FileType
Penalty

Score penalty for disagreements (-k)

2

penalty

number

Number of agreed tools

Specify the minimum number of tools agreed on WEVOTE decision (-a).

0


number-of-agreed-tools

number

Score threshold

Score threshold (-s)

0

score-threshold

number

Number of threads

Use multiple threads (-n).

8

threads

number

Output file

Specify the output text file name.

auto

output-url

string

Input/Output Ports

The element has 1 input port:

Name in GUI: Input classification CSV file

Input a CSV file in the following format: 1) a sequence name 2) taxID from the first tool 3) taxID from the second tool 4) etc.

Name in Workflow File: in

Slots:

SlotInGUISlot in Workflow FileType
Input URLurlstring

The element has 1 output port:

Name in GUI: WEVOTE Classification:  

A map of sequence names with the associated taxonomy IDs.

Name in Workflow File: out

Slots:

SlotInGUISlot in Workflow FileType

Taxonomy classification data

tax-data

tax-classification