Task Name: convert-msa
Converts a multiple sequence alignment file from one format to another.
Parameters:
in — input multiple sequence alignment file. [String, Required]
out — name of the output file. [String, Required]
format — format of the output file. [String, Optional]
The following values are available:
- clustal (default)
- fasta
- mega
- msf
- nexus
- phylip-interleaved
- phylip-sequential
- stockholm
Example:
ugene convert-msa --in=CBS.sto --out=CBS --format=msf