Child pages
  • Start-Start Constraint Element
Skip to end of metadata
Go to start of metadata

Add the Start-Start constraint to some two algorithm elements. Lets denote these elements as alg1 and alg2.

Parameters in GUI

ParameterDescriptionDefault value
Min distanceMinimum distance between an alg1 annotation start and an alg2 annotation start.0bp
Max distanceMaximum distance between an alg1 annotation start and an alg2 annotation start.0bp

Constraint Explanation:

Let:

alg1_annot_start := the first nucleotide of an annotation obtained from the alg1.

alg2_annot_start := the first nucleotide of an annotation obtained from the alg2.

The result annotations should comply with the rule:

Min distance <= Distance(alg1_annot_startalg2_annot_start) <= Max distance

Parameters in Schema File

Type: distance

Distance-type: start-to-start

ParameterParameter in the GUIType
minMin distancenumeric
maxMax distancenumeric
  • No labels