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Analyzes a nucleotide sequence with a UGENE Query Language (UQL) workflow. The workflow specifies a set of features to search for and their positional relationship.

To learn more about UQL workflows read UGENE Query Designer Manual.

Element type: query


ParameterDescriptionDefault valueParameter in Workflow FileType
Workflow (required)UQL workflow file.
MergeMerges regions of each result into a single annotation.Falsemergeboolean
OffsetIf the Merge parameter is set to True, adds left and right offsets of the specified length to the annotation.0offsetnumeric

Input/Output Ports

The element has 1 input port:

Name in GUI: Input sequences

Name in Workflow File: in-sequence


Slot In GUISlot in Workflow FileType

And 1 output port:

Name in GUI: Result annotations

Name in Workflow File: out-annotations


Slot In GUISlot in Workflow FileType
Set of annotationsannotationsannotation-table
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