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Plots the PhastCons score profiles.

Element type: conservation_plot-id


ParameterDescriptionDefault valueParameter in Workflow FileType
Output fileFile to store phastcons results (BMP).


TitleTitle of the figure (--title).Average Phastcons around the Center of Sitestitlestring
LabelLabel of data in the figure (--bed-label).Conservation_at_peak_summitslabelstring
Assembly versionThe directory to store phastcons scores (--phasdb).hg19assembly_versionstring
Window widthWindow width centered at middle of regions (-w).1000windos_snumeric
HeightHeight of plot (--height).1000heightnumeric
WidthWidth of plot (--width).1000widthnumeric

Input/Output Ports

The element has 1 input port:

Name in GUI: conservation_plot data

Name in Workflow File: in-data


Slot In GUISlot in Workflow FileType
Input regionscp_treat-annann-table-list

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