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Writes all supplied sequences to file(s) in FASTQ format.

Element type: write-fastq


ParameterDescriptionDefault valueParameter in Workflow FileType
Output file (required)Location of the output data file. If this attribute is set, then the “Location” slot is not taken into account.
Existing fileIf a target file already exists, you can specify how it should be handled: either overwritten, renamed or appended (if supported by file format).Renamewrite-mode


Available values are:

  • 0 - for overwrite
  • 1 - for append
  • 2 - for rename
Accumulate objectsAccumulates all incoming data in one file or creates separate files for each input. In the latter case, an incremental numerical suffix is added to a file name.Trueaccumulateboolean

Input/Output Ports

The element has 1 input port:

Name in GUI: Sequence

Name in Workflow File: in-sequence


Slot In GUISlot in Workflow FileType
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