Child pages
  • Create VCF consensus
Skip to end of metadata
Go to start of metadata

Apply VCF variants to a fasta file to create consensus sequence.

Parameters in GUI

ParameterDescriptionDefault value
Output FASTA consensusThe url to the output file with the result consensus. 

Parameters in Workflow File

Type: vcf-consensus

ParameterParameter in the GUIType
consensus-urlOutput FASTA consensus


Input/Output Ports

The element has 1 input ports:

Name in GUI: Input FASTA and VCF

Name in Workflow File: in-data


Slot In GUISlot in Workflow FileType
Fasta urlfastastring
VCF urlvcfstring

And 1 
output port:

Name in GUI: Fasta consensus url

Name in Workflow File: out-consensus


Slot In GUISlot in Workflow FileType



  • No labels