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  • Convert SnpEff Variations to Annotations Element
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Parses information, added to variations by SnpEff, into standard annotations.

Parameters in GUI

ParameterDescriptionDefault value
Output file

Location of output data file. If this attribute is set, slot "Location" in port will not be used.

Document format

Document format of output file.


Parameters in Workflow File

Type: convert-snpeff-variations-to-annotations

ParameterParameter in the GUIType
url-outOutput file


document-formatDocument formatstring

Input/Output Ports

The element has 1 input ports:

Name in GUI: Input file URL

Name in Workflow File: in-variations-url

Slot In GUISlot in Workflow FileType
Source URLurlstring
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