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WEVOTE (WEighted VOting Taxonomic idEntification) is a metagenome shortgun sequencing DNA reads classifier based on an ensemble of other classification methods (Kraken, CLARK, etc.).

Parameters in GUI

 

ParameterDescriptionDefaultvalue
Penalty

Score penalty for disagreements (-k)

2
Number of agreed tools

Specify the minimum number of tools agreed on WEVOTE decision (-a).

0

 

Score threshold

Score threshold (-s)

0
Number of threads

Use multiple threads (-n).

8
Output file

Specify the output text file name.

auto

Parameters in Workflow File

Type: wevote-classify

Parameter

Parameter in the GUI

Type

penalty

Penalty

number

number-of-agreed-tools

Number of agreed tools

number

score-threshold

Score threshold

number

threads

Number of threads

number

output-url

Output file

string

Input/Output Ports

The element has 1 input port:

Name in GUI: Input classification CSV file

Input a CSV file in the following format: 1) a sequence name 2) taxID from the first tool 3) taxID from the second tool 4) etc.

Name in Workflow File: in

Slots:

SlotInGUISlot in Workflow FileType
Input URLurlstring

The element has 1 output port:

Name in GUI: WEVOTE Classification:  

A map of sequence names with the associated taxonomy IDs.

Name in Workflow File: out

Slots:

SlotInGUISlot in Workflow FileType

Taxonomy classification data

tax-data

tax-classification

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