Input one or several files with annotations: a file may also contain a sequence (e.g. GenBank format) or contain annotations only (e.g. GTF format).
The element outputs message(s) with the annotations data.
See the list of all available formats here.
Parameters in GUI
| Parameter | Description | Default value |
|---|---|---|
| Input file(s) | Input files. | Dataset 1; |
| Mode | If the file contains more than one annotation table, Split mode sends them "as is" to the output, while Merge appends all the annotation tables and outputs the sole merged annotation table. In Merge files is the same as Merge but it operates with all annotation tables from all files of one dataset. | Merge |
Parameters in Workflow File
Type: read-annotations
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| url-in | Input file(s) | string |
| mode | Mode | numeric |
Input/Output Ports
The element has 1 output port:
Name in GUI: Annotations
Name in Workflow File: out-annotations
Slots:
| Slot In GUI | Slot in Workflow File | Type |
|---|---|---|
| Set of annotations | annotations | annotation-table-list |
| Dataset name | dataset | string |
| Source URL | out-url | string |