To build BWA-SW index MEM index select the Tools ‣ NGS data analysis ‣ Build index for reads mapping item in the main menu. The Build Index dialog will appears. Set the Map short reads method parameter to BWA-MEM.
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To build BWA-SW index MEM index select the Tools ‣ NGS data analysis ‣ Build index for reads mapping item in the main menu. The Build Index dialog will appears. Set the Map short reads method parameter to BWA-MEM.
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