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Title:	Configure Data for Metagenomics Classification
Author:	Yuliya Algaer	Aug 26, 2020
Last Changed by:	Yuliya Algaer	Aug 26, 2020
Tiny Link: (useful for email)	https://doc.ugene.net/wiki/x/QoDyAg
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Parent Page     Page: Reference Data for NGS

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Time	Editor
Aug 26, 2020 17:36	Yuliya Algaer

External Links (12)
    ftp://ftp.uniprot.org/pub/databases/uniprot/current_release…
    ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/
    https://bitbucket.org/biobakery/metaphlan2/downloads/
    https://www.ncbi.nlm.nih.gov/taxonomy
    ftp://ftp.ncbi.nih.gov/genomes/H_sapiens/CHR_*/hs_ref_GRC*c…
    https://ccb.jhu.edu/software/kraken/
    https://github.com/ugeneunipro/clark
    ftp://ftp.ncbi.nlm.nih.gov/refseq/release/bacteria/bacteria…
    ugene.net/download-all.html
    https://www.keka.io/en/
    ftp://ftp.uniprot.org/pub/databases/uniprot/current_release…
    ftp://ftp.ncbi.nlm.nih.gov/refseq/release/viral/viral*.geno…

Unipro UGENE User Manual v. 36 (1)     Page: Data Analysis Tools

Workflow Designer Documentation v. 1.31 (3)     Page: Classify Sequences with CLARK     Page: Parallel NGS Reads Classification     Page: Build Kraken Database