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  • Read Annotations Element
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Input one or several files with annotations: a file may also contain a sequence (e.g. GenBank format) or contain annotations only (e.g. GTF format).

The element outputs message(s) with the annotations data.

See the list of all available formats here.

Parameters in GUI

ParameterDescriptionDefault value
Input file(s)Input files.Dataset 1;
Mode

If the file contains more than one annotation table, Split mode sends them "as is" to the output, while Merge appends all the annotation tables and outputs the sole merged annotation table.

In Merge files is the same as Merge but it operates with all annotation tables from all files of one dataset.

Merge

Parameters in Workflow File 

Type: read-annotations

ParameterParameter in the GUIType
url-inInput file(s)string
modeModenumeric

Input/Output Ports

The element has 1 output port:

Name in GUI: Annotations

Name in Workflow File: out-annotations

Slots:

Slot In GUISlot in Workflow FileType
Set of annotationsannotationsannotation-table-list
Dataset namedatasetstring
Source URLout-urlstring
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