Assembling, browsing and analyzing of short reads assemblies
3. SAM/BAM files (Assembly Browser). If you open a file with a short reads assembly, like BAM or SAM files you see the following picture:
Example 3: Highlighting the strand of reads. You can do this using the context menu or the Options Panel.
3D structure viewer
Building and visualizing of phylogenetic trees
Running dozens of algorithms for analyzing
Importing and exporting data into different bio-formats
Combining algorithms into custom workflows with UGENE Workflow Designer